中国组织工程研究 ›› 2026, Vol. 30 ›› Issue (16): 4240-4252.doi: 10.12307/2026.734

• 组织构建相关数据分析 Date analysis of organization construction • 上一篇    下一篇

铜死亡相关基因在强直性脊柱炎发病中的潜在作用:多组学整合孟德尔随机化

宋志超,齐文蓉,孟  鹏,张妍妍   

  1. 烟台市中医医院,山东省烟台市  264000
  • 收稿日期:2025-07-09 接受日期:2025-08-30 出版日期:2026-06-08 发布日期:2025-11-29
  • 通讯作者: 张妍妍,硕士,主治医师,烟台市中医医院,山东省烟台市 264000
  • 作者简介:宋志超,男,1987年生,山东省青岛市人,汉族,硕士,主要从事中医内科学风湿病研究。
  • 基金资助:
    滨州医学院教学改革项目(SJJY201914),项目负责人:孟鹏;烟台市科技计划项目(2020MSGY087),项目参与人:
    宋志超

Potential effects of cuproptosis-related genes in the onset of ankylosing spondylitis: a multi-omics Mendelian randomization study

Song Zhichao, Qi Wenrong, Meng Peng, Zhang Yanyan   

  1. Yantai Hospital of Traditional Chinese Medicine, Yantai 264000, Shandong Province, China
  • Received:2025-07-09 Accepted:2025-08-30 Online:2026-06-08 Published:2025-11-29
  • Contact: Zhang Yanyan, MS, Attending physician, Yantai Hospital of Traditional Chinese Medicine, Yantai 264000, Shandong Province, China
  • About author:Song Zhichao, MS, Yantai Hospital of Traditional Chinese Medicine, Yantai 264000, Shandong Province, China
  • Supported by:
    Binzhou Medical University Teaching Reform Project, No. SJJY201914 (to MP); Yantai Science and Technology Plan Project, No. 2020MSGY087 (to SZC [project participant])

摘要:


文题释义:
铜死亡:铜与三羧酸循环中的脂化酶结合诱导蛋白质聚集和毒性应激,最终导致细胞死亡。铜死亡会表现出一系列主要形态学特征,包括线粒体收缩、细胞膜破裂、内质网损伤以及染色质破裂,但机制与已知的其他细胞死亡方式有所不同。
孟德尔随机化:是流行病学研究中一种基于全基因组测序数据评估病因推断的数据分析方法,它是利用与暴露因素具有强相关的遗传变异作为工具变量,来评估暴露因素与结局之间的因果关系。

背景:铜死亡可能参与强直性脊柱炎的发病机制,但目前仍缺乏直接的遗传学证据。
目的:基于多组学数据孟德尔随机化分析、异质性检验和共定位方法,探讨铜死亡相关基因与强直性脊柱炎之间的遗传关系。
方法:强直性脊柱炎相关的全基因组关联分析数据来自芬兰与赫尔辛基大学联合开发的FinnGen数据库、英国医学研究理事会和英国政府联合建设的UKB数据库以及欧洲分子生物学实验室-欧洲生物信息研究所开发的GWAS Catalog数据库,均为开放数据库,涉及的研究已获得相关机构审查委员会批准;获取与强直性脊柱炎相关的数量性状基因座中的血液甲基化、基因表达蛋白质丰度数据;将FinnGen相关数据作为主要发现集,同时辅助UK Biobank和GWAS Catalog数据集进行验证。使用多组学数据孟德尔随机化方法评估铜死亡相关基因的分子特征与强直性脊柱炎的潜在分子联系。通过共定位分析探索检测到的信号特征是否共享相同的遗传变异。GSE25101数据集来源于美国国家生物信息技术中心的GEO数据库(为开放数据库,涉及的研究已获得相关机构审查委员会批准),纳入16例强直性脊柱炎患者和16例健康人群的基因表达数据进行分析。
结果与结论:结果显示,癌胚抗原相关细胞附着分子8(cg09422614)、铁螯合还原酶1(cg09370016)、半乳糖3-O磺基转移酶1(cg04030848)、侧链蛋白5(cg03344820)、亚硫酸氧化酶(cg06495347、cg22580629)、胸苷磷酸化酶(cg11654620、cg16367976)等基因和位点可能与强直性脊柱炎存在遗传因果联系,在血液数量性状基因座和基因表达的多组学数据孟德尔随机化分析中,这些基因和位点均显示出显著的关联性。共定位分析进一步支持了半乳糖-3-O-磺基转移酶1、亚硫酸氧化酶和胸苷磷酸化酶的甲基化位点与强直性脊柱炎风险之间的关联证据(PP.H4 > 0.5)。甲基化调控机制表明,cg09422614、cg09370016和cg03344820位点的甲基化水平与强直性脊柱炎风险正相关,分别通过抑制癌胚抗原相关细胞附着分子8、铁螯合还原酶1和侧链蛋白5基因的表达水平而增加强直性脊柱炎风险;cg04030848、cg06495347和cg22580629位点的甲基化水平与强直性脊柱炎风险也呈正相关,分别通过正向调控所在基因的表达水平而增加强直性脊柱炎风险。胸苷磷酸化酶基因的表达水平则与强直性脊柱炎风险呈负相关,其位点cg11654620和cg16367976甲基化可以正向调控胸苷磷酸化酶基因的表达水平。GSE25101数据集血液样本检测结果显示,癌胚抗原相关细胞附着分子8、铁螯合还原酶1、侧链蛋白5、亚硫酸氧化酶、胸苷磷酸化酶在强直性脊柱炎发病机制中具有一定的调控作用,可能参与强直性脊柱炎的病理进程。该研究不仅揭示了铜死亡机制在强直性脊柱炎中的潜在致病作用,也为在中国人群中开展强直性脊柱炎多组学功能机制研究及精准诊断与个体化治疗提供了理论依据。
https://orcid.org/0009-0004-1585-4575(宋志超)

中国组织工程研究杂志出版内容重点:干细胞;骨髓干细胞;造血干细胞;脂肪干细胞;肿瘤干细胞;胚胎干细胞;脐带脐血干细胞;干细胞诱导;干细胞分化;组织工程

关键词: 强直性脊柱炎, 孟德尔随机化, 铜死亡, 共定位, 因果关联, 单核苷酸多态性

Abstract: BACKGROUND: Cuproptosis may be involved in the pathogenesis of ankylosing spondylitis, but there is a lack of direct genetic evidence.
OBJECTIVE: To investigate the genetic relationship between cuproptosis-related genes and ankylosing spondylitis using multi-omics Mendelian randomization analysis, heterogeneity testing, and colocalization methods. 
METHODS: The genome-wide association study (GWAS) data related to ankylosing spondylitis were obtained from the FinnGen database (jointly developed by Finland and the University of Helsinki), the UK Biobank (UKB) database (jointly established by the UK Medical Research Council and the UK government), and the GWAS Catalog database (developed by the European Molecular Biology Laboratory and the European Bioinformatics Institute). All these databases are open access, and the studies involved have been approved by the relevant institutional review boards. We acquired quantitative trait loci data related to ankylosing spondylitis, specifically focusing on blood methylation, gene expression, and protein abundance. We used data from FinnGen as the primary discovery set, further validating our findings with supplementary data from the UK Biobank and the GWAS Catalog. The multi-omics Mendelian randomization method helped us assess the potential molecular links between the molecular features of cuproptosis-related genes and ankylosing spondylitis. Finally, we employed colocalization analysis to determine if the detected genetic signals shared common causal variants.  
RESULTS AND CONCLUSION: Our analysis revealed potential genetic causal links between ankylosing spondylitis and several genes and loci, including carcinoembryonic antigen-related cell adhesion molecule 8 (cg09422614), ferric chelate reductase 1 (cg09370016), galactose-3-O sulfotransferase 1 (cg04030848), sideroflexin 5 (cg03344820), sulfite oxidase (cg06495347, cg22580629), thymidine phosphorylase (cg11654620, cg16367976). These genes and loci showed significant associations in multi-omics Mendelian randomization analyses involving both blood mQTLs and eQTLs. Colocalization analysis further strengthened the evidence for an association between the methylation loci of galactose-3-O sulfotransferase 1, sulfite oxidase, and thymidine phosphorylase and the risk of ankylosing spondylitis (PP.H4 > 0.5). Our investigation into methylation regulatory mechanisms indicated that increased methylation levels at cg09422614, cg09370016, and cg03344820 were positively correlated with the risk of ankylosing spondylitis. The risk of ankylosing spondylitis was increased by positively regulating the expression levels of these genes. Conversely, while methylation levels at cg04030848, cg06495347, and cg22580629 also showed a positive correlation with the risk of ankylosing spondylitis, and they appeared to increase the risk of ankylosing spondylitis by positively regulating the expression levels of their respective genes. Interestingly, thymidine phosphorylase gene expression levels showed a negative correlation with the risk of ankylosing spondylitis, with methylation at cg11654620 and cg16367976 positively regulating thymidine phosphorylase gene expression. The GSE25101 dataset blood sample analysis indicated that carcinoembryonic antigen-related cell adhesion molecule 8, ferric chelate reductase 1, galactose-3-O sulfotransferase 1, sideroflexin 5, sulfite oxidase, and thymidine phosphorylase exert regulatory effects in the pathogenesis of ankylosing spondylitis and may participate in its pathological progression. This study not only sheds light on the potential pathogenic role of cuproptosis mechanisms in ankylosing spondylitis but also offers a theoretical basis for future multi-omics functional mechanism research and precision diagnosis and individualized treatment of ankylosing spondylitis, particularly within the Chinese population.


Key words: ankylosing spondylitis, Mendelian randomization, cuproptosis, colocalization, causal association, single nucleotide polymorphism

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