Chinese Journal of Tissue Engineering Research ›› 2017, Vol. 21 ›› Issue (28): 4505-4511.doi: 10.3969/j.issn.2095-4344.2017.28.013
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He Yu-tong1, Zhang Ma-hui2, Song Chen1, Ye Gen-lan1, Yu Lei1, Qiu Xiao-zhong1, Wang Le-yu1
Revised:
2017-06-09
Online:
2017-10-08
Published:
2017-11-10
Contact:
Wang Le-yu, M.D., Associate professor, Department of Human Anatomy, Southern Medical University, Guangdong Provincial Key Laboratory of Construction and Detection in Tissue Engineering, Guangzhou 510515, Guangdong Province, China
About author:
He Yu-tong, Studying for master’s degree, Department of Human Anatomy, Southern Medical University, Guangdong Provincial Key Laboratory of Construction and Detection in Tissue Engineering, Guangzhou 510515, Guangdong Province, China;
Zhang Ma-hui, Master, Department of Neurology, Zhujiang Hospital of Southern Medical University, Guangzhou 510515, Guangdong Province, China
He Yu-tong and Zhang Ma-hui contributed equally to this work.
Supported by:
the National Natural Science Foundation of China, No. 31100700; the Guangdong Provincial Medical Research Foundation, No. A2015412
CLC Number:
He Yu-tong, Zhang Ma-hui, Song Chen, Ye Gen-lan, Yu Lei, Qiu Xiao-zhong, Wang Le-yu. MicroRNA expression profile in the process of cyclic mechanical stretch promoting C2C12 myogenesis[J]. Chinese Journal of Tissue Engineering Research, 2017, 21(28): 4505-4511.
2.2 10%形变、0.125 Hz拉伸频率可促进C2C12细胞myoD和myogenin基因表达升高 由图2所示,0.125 Hz拉伸频率的C2C12细胞myoD和myogenin基因的表达与对照组比较显著升高(P < 0.05);0.25 Hz拉伸频率的C2C12细胞中成肌因子的表达与对照组比较差异无显著性意义;0.5 Hz拉伸频率的C2C12细胞中myoD和myogenin基因的表达与对照组比较显著降低(P < 0.05)。 2.3 10%形变、0.125 Hz拉伸C2C12成肌细胞后microRNA表达谱的变化 通过高通量测序检测,0.125 Hz的拉伸组对照组C2C12成肌细胞比较其表达有明显差异且P < 0.05的共有10个microRNA。其中拉伸组有7个下调的microRNA,分别是miR-331-3p, miR-5097,miR-500-3p,miR-3473b,miR-1934-5p,miR-31-3p,miR-378a-5p。而有3个是拉伸组上调的microRNA,分别是miR-1941- 3p,miR-340-5p,miR-449c-5p(表3)。 2.4 生物信息学结果分析(GO分析,KEGG分析) 从GO富集分析的结果显示,拉伸组与对照组表达有差异的microRNA预测靶点的分子,其功能在金属离子结合,锌离子结合,蛋白结合,离子结合等方面富集较为显著。因此预测靶点所在的位置应在细胞内,细胞内部分,胞内有界膜细胞器,有界膜细胞器,细胞器等条目富集显著。预测靶点参与的生命活动在刺激反应调节,信号调节,细胞新陈代谢过程调节,信号传导调节,细胞正分组成等方面富集显著,而P值越小越有理由说明在该条目富集越显著(图3)。 KEGG通路分析的结果显示,显著富集的通路共有29条,而其中与骨骼肌的损伤修复有关的通路有:T细胞受体信号通路,磷脂酰肌醇信号通路,肌萎缩侧索硬化,肌动蛋白细胞骨架调节通路,B细胞受体信号通路,MAPK信号通路,转化生长因子β信号通路,趋化因子信号通路,黏附连接,磷酸盐和亚磷酸盐代谢通路,统计学分析显示P < 0.05为显著富集,且P值越小,说明在该条目越富集(图4)。"
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